Dmitry A. Fedosov
Division of Applied Mathematics
Brown University

my new page at Forschungszentrum Juelich, Germany


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Here you can find my up-to-date CV.

Curriculum Vitae   [PDF]

Contact Info

Address: Institute of Complex Systems, ICS-2, Forschungszentrum Juelich, 52425 Juelich, Germany
Tel: +49(2461) 61-2972
Fax: +49(2461) 61-2850
E-mail: d.fedosov AT fz-juelich.de
URL: http://iffwww.iff.kfa-juelich.de/~fedosov/D_Fedosov.html


Education

Jan 2010 PhD in Applied Mathematics, Brown University, USA
Advisors: George E. Karniadakis & Bruce Caswell
Thesis: Multiscale Modeling of Blood Flow and Soft Matter
May 2007 Master of Science in Applied Mathematics, Brown University, USA
Advisors: George E. Karniadakis & Bruce Caswell
Aug 2004 Master of Science in Aerospace Engineering, Minor in High Performance Computing, Pennsylvania State University, USA
Advisor: Deborah A. Levin
June 2002 Bachelor of Science in Mathematics, Minor in Computer Science, Novosibirsk State University, Russia


Research experience

Feb 2010 - present Postdoc, Institute of Solid State Research, Theory II, Forschungszentrum Juelich
Supervisor: Gerhard Gompper
Sep 2004 - Jan 2010 Research Assistant, Division of Applied Mathematics, Brown University
Advisors: George E. Karniadakis & Bruce Caswell
Sep 2002 - Aug 2004 Research Assistant, Department of Aerospace Engineering, Pennsylvania State University
Advisor: Deborah A. Levin


Awards and fellowships

Sep 2009 - Jan 2010 Simon Ostrach fellowship, Brown University
Sep 2004 - May 2005 Academic fellowship, Brown University


Teaching experience

Jan 2009 - May 2009 Teaching Assistant, Division of Applied Mathematics, Brown University
Course: Introduction to Computing Sciences
Sep 2008 - Dec 2008 Teaching Assistant, Division of Applied Mathematics, Brown University
Course: Statistical Inference I
Jan 2007 - May 2007 Teaching Assistant, Division of Applied Mathematics, Brown University
Course: Methods of Applied Mathematics I
Sep 2005 - May 2006 Mathematics Resource Center Tutor, Department of Mathematics, Brown University


Publications

Articles in peer-reviewed journals

  1. D. A. Fedosov, B. Caswell, S. Suresh, and G. E. Karniadakis, "Quantifying the biophysical characteristics of Plasmodium-falciparum-parasitized red blood cells in microcirculation", Proceedings of the National Academy of Sciences USA, submitted, 2010.
  2. D. A. Fedosov, B. Caswell, S. Suresh, and G. E. Karniadakis, "Multiscale modeling of red blood cells in malaria", Biophysical Journal, submitted, 2010.
  3. W. Pan, D. A. Fedosov, B. Caswell, and G. E. Karniadakis, "A comparison of multiscale and low-dimensional models of red blood cells", Microvascular Research, submitted 2010.
  4. D. A. Fedosov, B. Caswell, and G. E. Karniadakis, "A multiscale red blood cell model with accurate mechanics, rheology, and dynamics", Biophysical Journal, 98(10), in press, 2010.
  5. D. A. Fedosov, B. Caswell, and G. E. Karniadakis, "Systematic coarse-graining of spectrin-level red blood cell models", Computer Methods in Applied Mechanics and Engineering, doi:10.1016/j.cma.2010.02.001, in press, 2010.
  6. D. A. Fedosov, B. Caswell and G. E. Karniadakis, "Steady shear rheometry of dissipative particle dynamics models of polymer fluids in reverse Poiseuille flow", Journal of Chemical Physics, 132(14), 144103, 2010.
  7. D. A. Fedosov and G. E. Karniadakis, "Triple-decker: Interfacing atomistic-mesoscopic-continuum flow regimes", Journal of Computational Physics, 228(4), 1157-1171, 2009.
  8. W. Pan, D. A. Fedosov, B. Caswell and G. E. Karniadakis, "Hydrodynamic interactions for single dissipative-particle-dynamics particles and their clusters and filaments", Physical Review E, 78(4), 046706, 2008.
  9. D. A. Fedosov, B. Caswell and G. E. Karniadakis, "Dissipative particle dynamics simulation of depletion layer and polymer migration in micro- and nanochannels for dilute polymer solutions", Journal of Chemical Physics, 128(14), 144903, 2008. Selected for publication in Virtual Journal of Nanoscale Science & Technology, 17(17), April 28 2008.
  10. D. A. Fedosov, I. V. Pivkin and G. E. Karniadakis, "Velocity limit in DPD simulations of wall-bounded flows", Journal of Computational Physics, 227(4), 2540-2559, 2008.
  11. A. A. Alexeenko, D. A. Fedosov, D. A. Levin, S. F. Gimelshein, and R. J. Collins, "Transient heat transfer and gas flow in a MEMS-based thruster", Journal of Microelectromechanical Systems, 15(1), 181-194, 2006.
  12. A. A. Alexeenko, D. A. Fedosov, D. A. Levin, S. F. Gimelshein, and R. J. Collins, "Performance analysis of microthrusters based on coupled thermal-fluid modeling and simulation", Journal of Propulsion and Power, 21(1), 95-101, 2005.
  13. T. Ozawa, D. A. Fedosov, D. A. Levin, S. F. Gimelshein, "Quasi-classical trajectory modeling of OH production in direct simulation Monte Carlo", Journal of Thermophysics and Heat Transfer, 19(2), 235-244, 2005.
Book chapters

  1. D. A. Fedosov, B. Caswell, and G. E. Karniadakis, "Dissipative particle dynamics modeling of red blood cells", in Computational Hydrodynamics of Capsules and Biological Cells edited by C. Pozrikidis, Taylor & Francis Group, in press, 2010.
Articles in conference proceedings

  1. D. A. Fedosov, B. Caswell and G. E. Karniadakis, "Multiscale modeling of blood flow in cerebral malaria", Proceedings of ASME 2010 First Global Congress on NanoEngineering for Medicine and Biology, NEMB, 2010.
  2. D. A. Fedosov, B. Caswell and G. E. Karniadakis, "Coarse-grained red blood cell model with accurate mechanical properties, rheology and dynamics", Proceedings of the Engineering in Medicine and Biology Society, EMBC, 2009 Annual International Conference of the IEEE, 2009.
  3. D. A. Fedosov, B. Caswell and G. E. Karniadakis, "Dissipative particle dynamics simulation of polymer- and cell-wall depletion in micro-channels", Proceedings of the XV International Congress on Rheology: The Society of Rheology 80th Annual Meeting, AIP Conference Proceedings, 1027(1), 612-614, 2008.
  4. D. A. Fedosov, B. Caswell and G. E. Karniadakis, "Reverse Poiseuille flow: The numerical viscometer", Proceedings of the XV International Congress on Rheology: The Society of Rheology 80th Annual Meeting, AIP Conference Proceedings, 1027(1), 1432-1434, 2008.
  5. D. A. Fedosov, S. V. Rogazinsky, M. I. Zeifman, M. S. Ivanov, A. A. Alexeenko, and D. A. Levin, "Analysis of numerical errors in the DSMC method", Proceedings of the Rarefied Gas Dynamics: 24th International Symposium on Rarefied Gas Dynamics, AIP Conference Proceedings, 762(1), 589-594, 2005.
  6. T. Ozawa, D. A. Fedosov, and D. A. Levin, "Modeling of OH product distributions using QCT-MD and BL models in a bow shock", Proceedings of the Rarefied Gas Dynamics: 24th International Symposium on Rarefied Gas Dynamics, AIP Conference Proceedings, 762(1), 902-907, 2005.
  7. T. Ozawa, D. A. Fedosov, D. A. Levin, and S. F. Gimelshein, "Use of quasi-classical trajectory methods in the modeling of OH production mechanisms in DSMC", AIAA Paper 2004-0336, 42nd AIAA Aerospace Sciences Meeting, 2004.
  8. A. A. Alexeenko, D. A. Levin, D. A. Fedosov, S. F. Gimelshein, and R. J. Collins, "Coupled thermal-fluid modeling of micronozzles for performance analysis", AIAA Paper 2003-4717, 39th AIAA/ASME/SAE/ASEE Joint Propulsion Conference and Exhibit, 2003.
  9. A. A. Alexeenko, D. A. Levin, D. A. Fedosov, S., F. Gimelshein, R. J. Collins, "Coupled thermal-fluid analyses of microthruster flows", AIAA Paper 2003-0673, 41st Aerospace Sciences Meeting and Exhibit, 2003.


Research interests

  • rheology and dynamics of complex and biological fluids and suspensions
  • mesoscopic simulations of complex fluids and biological systems
  • red blood cells and blood flow modeling in health and disease
  • multiscale modeling bridging atomistic-mesoscopic-continuum scales
  • numerical rheometry
  • mesoscopic methods (e.g., Dissipative Particle Dynamics)
  • high-performance computing


Reviews for

  • Journal of Computational Physics
  • Journal of Microfluidics and Nanofluidics
  • Journal of Macromolecules


Professional memberships

2009 - present Member of the Engineering in Medicine and Biology Society
2009 - present Member of the Institute of Electrical and Electronics Engineers
2008 - present Member of Society for Industrial and Applied Mathematics
2004 - present Member of American Mathematical Society
2006 - present Member of Society of Rheology
2002 - 2004 Member of American Institute of Aeronautics and Astronautics


References

  1. Prof. Gerhard Gompper, Institute of Solid State Research, Theory II, Forschungszentrum Juelich, 52425 Juelich, Germany, tel: +49(2461)61-4012, email: g.gompper AT fz-juelich.de.
  2. Prof. George E. Karniadakis, Division of Applied Mathematics, Brown University, 182 George Street, Providence, RI 02914, tel: +1(401)863-1217, email: gk AT dam.brown.edu.
  3. Prof. Bruce Caswell, Division of Engineering, Brown University, 182 Hope Street, Providence, RI 02914, tel: +1(401)863-1448, email: caswell AT cfm.brown.edu.


Conferences

  1. 62nd Annual Meeting of the APS Division of Fluid Dynamics, Minneapolis MN, November 2009, presentation "Multiscale modeling of blood flow in cerebral malaria".
  2. 81st Annual Meeting of The Society of Rheology, Madison WI, October 2009, presentation "A numerical simulation study of rheology and dynamics of healthy red blood cells and parasitized by Plasmodium falciparum".
  3. 31st Annual International Conference of the IEEE Engineering in Medicine and Biology Society, Minneapolis MN, September 2009, presentation "Coarse-grained red blood cell model with accurate mechanical properties, rheology and dynamics".
  4. Fifth International Workshop on Meshfree Methods for Partial Differential Equations, Bonn Germany, August 2009, presentation "Triple-decker: Interfacing atomistic-mesoscopic-continuum flow regimes".
  5. 10th US National Congress on Computational Mechanics, Columbus OH, July 2009, presentation "Multiscale modeling of blood flow in cerebral malaria".
  6. SIAM Conference on Computational Science and Engineering, Miami FL, March 2009, presentation "Multiscale modeling in complex fluids and soft matter".
  7. SIAM Conference on Computational Science and Engineering, Miami FL, March 2009, presentation "Unsteady 3D flow simulations in cranial arterial tree".
  8. SIAM Conference on the Life Sciences, Montreal, QC Canada, August 2008, presentation "Triple-decker: Interfacing atomistic-mesoscopic-continuum flow regimes in biological fluids".
  9. SIAM Conference on the Life Sciences, Montreal, QC Canada, August 2008, poster "A stochastic molecular dynamics method for multiscale modeling of blood platelet phenomena".
  10. Meeting of Society of Rheology, Salt Lake City UT, October 2007, presentation "DPD simulation of depletion layer and polymer migration in micro- and nanochannels for dilute polymer solutions".
  11. 5th Annual Workshop on Charm++ and its Applications, Parallel Programming Lab, University of Illinois at Urbana-Champaign, April 2007.
  12. Meeting of Society of Rheology, Portland ME, October 2006.
  13. 3rd International Conference for Mesoscopic Methods in Engineering and Science, Hampton VA, July 2006, presentation "Reynolds number limit in DPD simulations of wall-bounded flows".